Package: VertexWiseR 1.0.1

Charly Billaud

VertexWiseR: Simplified Vertex-Wise Analyses of Whole-Brain and Hippocampal Surface

Provides functions to run statistical analyses on surface-based neuroimaging data, computing measures including cortical thickness and surface area of the whole-brain and of the hippocampi. It can make use of 'FreeSurfer', 'fMRIprep' and 'HCP' preprocessed datasets and 'HippUnfold' hippocampal segmentation outputs for a given sample by restructuring the data values into a single file. The single file can then be used by the package for analyses independently from its base dataset and without need for its access.

Authors:Junhong Yu [aut], Charly Billaud [aut, cre]

VertexWiseR_1.0.1.tar.gz
VertexWiseR_1.0.1.zip(r-4.5)VertexWiseR_1.0.1.zip(r-4.4)VertexWiseR_1.0.1.zip(r-4.3)
VertexWiseR_1.0.1.tgz(r-4.4-any)VertexWiseR_1.0.1.tgz(r-4.3-any)
VertexWiseR_1.0.1.tar.gz(r-4.5-noble)VertexWiseR_1.0.1.tar.gz(r-4.4-noble)
VertexWiseR_1.0.1.tgz(r-4.4-emscripten)VertexWiseR_1.0.1.tgz(r-4.3-emscripten)
VertexWiseR.pdf |VertexWiseR.html✨
VertexWiseR/json (API)

Peer review:

Bug tracker:https://github.com/cogbrainhealthlab/vertexwiser/issues

On CRAN:

17 exports 1 stars 2.75 score 70 dependencies 5 scripts 619 downloads

Last updated 1 hours agofrom:c4e8e1ae5a. Checks:OK: 7. Indexed: yes.

Exports:atlas_to_surfdecode_surf_datafs_statsfs5_to_fs6fs6_to_fs5FSLRvextractHIPvextractplot_surfRFT_vertex_analysissmooth_surfsurf_to_atlassurf_to_volSURFvextractTFCE_thresholdTFCE_vertex_analysisTFCE_vertex_analysis_mixedVWRfirstrun

Dependencies:abindbase64encbitopsbslibcachemciftiToolsclicodetoolscpp11curldigestdoParalleldoSNOWdotCall64downloaderevaluatefastmapfieldsfontawesomeforeachfreesurferformatsfsgiftiglueherehighrhtmltoolshtmlwidgetsigraphiteratorsjquerylibjsonliteknitrlatticelifecyclemagrittrmapsMatrixmemoisemimeoro.niftipkgconfigpkgfilecachepngR.methodsS3R.ooR.utilsR6rappdirsRColorBrewerRcppRcppTOMLreticulaterglrlangrmarkdownRNiftirprojrootsasssnowspamstringistringrtinytexvctrsviridisLitewithrxfunxml2yaml